Geometry of thermodynamic control

Patrick R. Zulkowski, David A. Sivak, Gavin E. Crooks, and Michael R. DeWeese
Phys. Rev. E 86, 041148 – Published 26 October 2012

Abstract

A deeper understanding of nonequilibrium phenomena is needed to reveal the principles governing natural and synthetic molecular machines. Recent work has shown that when a thermodynamic system is driven from equilibrium then, in the linear response regime, the space of controllable parameters has a Riemannian geometry induced by a generalized friction tensor. We exploit this geometric insight to construct closed-form expressions for minimal-dissipation protocols for a particle diffusing in a one-dimensional harmonic potential, where the spring constant, inverse temperature, and trap location are adjusted simultaneously. These optimal protocols are geodesics on the Riemannian manifold and reveal that this simple model has a surprisingly rich geometry. We test these optimal protocols via a numerical implementation of the Fokker-Planck equation and demonstrate that the friction tensor arises naturally from a first-order expansion in temporal derivatives of the control parameters, without appealing directly to linear response theory.

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  • Received 21 August 2012

DOI:https://doi.org/10.1103/PhysRevE.86.041148

©2012 American Physical Society

Authors & Affiliations

Patrick R. Zulkowski*

  • Department of Physics, University of California, Berkeley, California 94720 and Redwood Center for Theoretical Neuroscience, University of California, Berkeley, California 94720

David A. Sivak and Gavin E. Crooks

  • Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720

Michael R. DeWeese§

  • Department of Physics, University of California, Berkeley, California 94720, Redwood Center for Theoretical Neuroscience, University of California, Berkeley California 94720 and Helen Wills Neuroscience Institute, University of California, Berkeley California 94720

  • *pzulkowski@berkeley.edu
  • dasivak@lbl.gov; Present address: Center for Systems and Synthetic Biology, University of California, San Francisco, CA 94158; david.sivak@ucsf.edu
  • gecrooks@lbl.gov
  • §deweese@berkeley.edu

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Issue

Vol. 86, Iss. 4 — October 2012

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