Entropy measures, entropy estimators, and their performance in quantifying complex dynamics: Effects of artifacts, nonstationarity, and long-range correlations

Wanting Xiong, Luca Faes, and Plamen Ch. Ivanov
Phys. Rev. E 95, 062114 – Published 12 June 2017

Abstract

Entropy measures are widely applied to quantify the complexity of dynamical systems in diverse fields. However, the practical application of entropy methods is challenging, due to the variety of entropy measures and estimators and the complexity of real-world time series, including nonstationarities and long-range correlations (LRC). We conduct a systematic study on the performance, bias, and limitations of three basic measures (entropy, conditional entropy, information storage) and three traditionally used estimators (linear, kernel, nearest neighbor). We investigate the dependence of entropy measures on estimator- and process-specific parameters, and we show the effects of three types of nonstationarities due to artifacts (trends, spikes, local variance change) in simulations of stochastic autoregressive processes. We also analyze the impact of LRC on the theoretical and estimated values of entropy measures. Finally, we apply entropy methods on heart rate variability data from subjects in different physiological states and clinical conditions. We find that entropy measures can only differentiate changes of specific types in cardiac dynamics and that appropriate preprocessing is vital for correct estimation and interpretation. Demonstrating the limitations of entropy methods and shedding light on how to mitigate bias and provide correct interpretations of results, this work can serve as a comprehensive reference for the application of entropy methods and the evaluation of existing studies.

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  • Received 25 January 2017
  • Revised 27 April 2017

DOI:https://doi.org/10.1103/PhysRevE.95.062114

©2017 American Physical Society

Physics Subject Headings (PhySH)

Interdisciplinary PhysicsNonlinear DynamicsPhysics of Living SystemsStatistical Physics & Thermodynamics

Authors & Affiliations

Wanting Xiong1,2, Luca Faes3, and Plamen Ch. Ivanov2,4,5,*

  • 1School of Systems Science, Beijing Normal University, Beijing 100875, People's Republic of China
  • 2Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA
  • 3Bruno Kessler Foundation and BIOtech, University of Trento, Trento 38123, Italy
  • 4Harvard Medical School and Division of Sleep Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, USA
  • 5Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia 1784, Bulgaria

  • *plamen@buphy.bu.edu

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Issue

Vol. 95, Iss. 6 — June 2017

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