Anomalous Diffusion in Fractal Globules

M. V. Tamm, L. I. Nazarov, A. A. Gavrilov, and A. V. Chertovich
Phys. Rev. Lett. 114, 178102 – Published 30 April 2015
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Abstract

The fractal globule state is a popular model for describing chromatin packing in eukaryotic nuclei. Here we provide a scaling theory and dissipative particle dynamics computer simulation for the thermal motion of monomers in the fractal globule state. Simulations starting from different entanglement-free initial states show good convergence which provides evidence supporting the existence of a unique metastable fractal globule state. We show monomer motion in this state to be subdiffusive described by X2(t)tαF with αF close to 0.4. This result is in good agreement with existing experimental data on the chromatin dynamics, which makes an additional argument in support of the fractal globule model of chromatin packing.

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  • Received 6 June 2014

DOI:https://doi.org/10.1103/PhysRevLett.114.178102

© 2015 American Physical Society

Authors & Affiliations

M. V. Tamm1,2,*, L. I. Nazarov1, A. A. Gavrilov1,3, and A. V. Chertovich1

  • 1Physics Department, Moscow State University, 119991 Moscow, Russia
  • 2Department of Applied Mathematics, National Research University Higher School of Economics, 101000 Moscow, Russia
  • 3Institute for Advanced Energy Related Nanomaterials, University of Ulm, D-89069 Ulm, Germany

  • *Corresponding author. tamm@polly.phys.msu.ru.

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Vol. 114, Iss. 17 — 1 May 2015

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