Quantitative approach to small-scale nonequilibrium systems

Jakob Kisbye Dreyer, Kirstine Berg-Sørensen, and Lene Oddershede
Phys. Rev. E 73, 051110 – Published 24 May 2006

Abstract

In a nanoscale system out of thermodynamic equilibrium, it is important to account for thermal fluctuations. Typically, the thermal noise contributes fluctuations, e.g., of distances that are substantial in comparison to the size of the system and typical distances measured. If the thermal fluctuations are ignored, misinterpretation of measured quantities such as interaction forces, potentials, and constants may result. Here, we consider a particle moving in a time-dependent landscape, as, e.g., in an optical tweezers or atomic force nanoscopic measurement. Based on the Kramers equation [H. A. Kramers, Physica 7, 284 (1940)], we propose an approximate but quantitative way of dealing with such an out-of-equilibrium system. The limits of this approximate description of the escape process are determined through optical tweezers experiments and comparison to simulations. Also, this serves as a recipe for how to use the proposed method to obtain knowledge about the underlying energy landscape from a set of experimental measurements. Finally, we perform estimates of the error made if thermal fluctuations are ignored.

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  • Received 14 June 2005

DOI:https://doi.org/10.1103/PhysRevE.73.051110

©2006 American Physical Society

Authors & Affiliations

Jakob Kisbye Dreyer1,*, Kirstine Berg-Sørensen2,1,†, and Lene Oddershede1,‡

  • 1Niels Bohr Institute, Blegdamsvej 17, DK-2100 Copenhagen, Denmark
  • 2Department of Physics, Technical University of Denmark, DK-2800 Lyngby, Denmark

  • *Present address: Device Chemistry and Biology, Novo Nordisk, DK 3400 Hillerød, Denmark. Electronic address: jkid@novonordisk.com
  • Electronic address: kirstine.berg-sorensen@fysik.dtu.dk
  • Corresponding author. Electronic address: oddershede@nbi.dk

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Issue

Vol. 73, Iss. 5 — May 2006

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