Abstract
Stochastic thermodynamics has largely succeeded in characterizing both equilibrium and far-from-equilibrium phenomena. Yet many opportunities remain for application to mesoscopic complex systems—especially biological ones—whose effective dynamics often violate detailed balance and whose microscopic degrees of freedom are often unknown or intractable. After reviewing excess and housekeeping energetics—the adaptive and homeostatic components of a system's dissipation—we extend stochastic thermodynamics with a trajectory class fluctuation theorem for nonequilibrium steady-state, nondetailed-balanced complex systems. We then take up the neurobiological examples of voltage-gated sodium and potassium ion channels to apply and illustrate the theory, elucidating their nonequilibrium behavior under a biophysically plausible action potential drive. These results uncover challenges for future experiments and highlight the progress possible understanding the thermodynamics of complex systems—without exhaustive knowledge of every underlying degree of freedom.
3 More- Received 26 February 2022
- Revised 20 August 2022
- Accepted 15 September 2022
DOI:https://doi.org/10.1103/PhysRevE.106.044410
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