Dynamical properties of the hydration shell of fully deuterated myoglobin

Klaus Achterhold, Andreas Ostermann, Martine Moulin, Michael Haertlein, Tobias Unruh, and Fritz G. Parak
Phys. Rev. E 84, 041930 – Published 25 October 2011

Abstract

Freeze-dried perdeuterated sperm whale myoglobin was kept in a water-saturated atmosphere in order to obtain a hydration degree of 335 1H2O molecules per one myoglobin molecule. Incoherent neutron scattering was performed at the neutron spectrometer TOFTOF at the FRM II in an angular range of q from 0.6 to 1.8 Å1 and a temperature range from 4 to 297 K. We used neutrons with a wavelength of λ αE 6 Å and an energy resolution of about 65 μeV corresponding to motions faster than 10 ps. At temperatures above 225 K, broad lines appear in the spectra caused by quasielastic scattering. For an explanation of these lines, we assumed that there are only two types of protons, those that are part of the hydration water (72%) and those that belong to the protein (28%). The protons of the hydration water were analyzed with the diffusion model of Singwi and Sjölander [Phys. Rev. 119, 863 (1960)]. In this model, a water molecule stays for a time τ0 in a bound state performing oscillatory motions. Thereafter, the molecule performs free diffusion for the time τ1 in a nonbound state followed again by the oscillatory motions for τ0 and so forth. We used the general formulation with no simplifications as τ0τ1 or τ1τ0. At room temperature, we obtained τ0 αE 104 ps and τ1 αE 37 ps. For the protein bound hydrogen, the dynamics is described by a Brownian oscillator where the protons perform overdamped motions in limited space.

  • Figure
  • Figure
  • Figure
  • Received 24 May 2011

DOI:https://doi.org/10.1103/PhysRevE.84.041930

©2011 American Physical Society

Authors & Affiliations

Klaus Achterhold1, Andreas Ostermann2, Martine Moulin3, Michael Haertlein3, Tobias Unruh2,4, and Fritz G. Parak1,*

  • 1Physik-Department E17, Technische Universität München, James-Franck-Strasse 1, D-85747 Garching, Germany
  • 2Forschungs-Neutronenquelle Heinz Maier-Leibnitz (FRM II), ZWE, Lichtenbergstrasse 1, D-85747 Garching, Germany
  • 3ILL-EMBL Deuteration Laboratory, Partnership for Structural Biology, 6, rue Jules Horowitz, F-38042 Grenoble Cedex 9, France
  • 4Institut für Physik der Kondensierten Materie, Lehrstuhl für Kristallographie und Strukturphysik, Staudtstrasse 3, D-91058 Erlangen, Germany

  • *fritz.parak@ph.tum.de

Article Text (Subscription Required)

Click to Expand

References (Subscription Required)

Click to Expand
Issue

Vol. 84, Iss. 4 — October 2011

Reuse & Permissions
Access Options
Author publication services for translation and copyediting assistance advertisement

Authorization Required


×
×

Images

×

Sign up to receive regular email alerts from Physical Review E

Log In

Cancel
×

Search


Article Lookup

Paste a citation or DOI

Enter a citation
×