Adaptive molecular resolution via a continuous change of the phase space dimensionality

Matej Praprotnik, Kurt Kremer, and Luigi Delle Site
Phys. Rev. E 75, 017701 – Published 9 January 2007

Abstract

For the study of complex synthetic and biological molecular systems by computer simulations one is still restricted to simple model systems or by far too small time scales. To overcome this problem multiscale techniques are being developed. However, in almost all cases, the regions and molecules of different resolution are kept fixed and are not in equilibrium with each other. We here give a basic theoretical framework for an efficient and flexible coupling of the different regimes. The approach leads to a concept, which can be seen as a geometry-induced phase transition, and to a counterpart of the equipartition theorem for fractional degrees of freedom. This represents the initial step in developing a general theoretical framework for computer simulation methods applying simultaneously different levels of resolution.

  • Figure
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  • Received 21 June 2006

DOI:https://doi.org/10.1103/PhysRevE.75.017701

©2007 American Physical Society

Authors & Affiliations

Matej Praprotnik*, Kurt Kremer, and Luigi Delle Site

  • Max-Planck-Institut für Polymerforschung, Ackermannweg 10, D-55128 Mainz, Germany

  • *On leave from the National Institute of Chemistry, Hajdrihova 19, SI-1001 Ljubljana, Slovenia. Electronic mail: praprot@cmm.ki.si

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Vol. 75, Iss. 1 — January 2007

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