Electrostatic interaction between long, rigid helical macromolecules at all interaxial angles

A. A. Kornyshev and S. Leikin
Phys. Rev. E 62, 2576 – Published 1 August 2000
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Abstract

We derive formulas for the electrostatic interaction between two long, rigid macromolecules that may have arbitrary surface charge patterns and cross at an arbitrary interaxial angle. We calculate the dependence of the interaction energy on the interaxial angle, on the separation, and on the precise alignment of the charge pattern on one molecule with respect to the other. We focus in particular on molecules with helical charge patterns. We report an exact, explicit expression for the energy of interaction between net-neutral helices in a nonpolar medium as well as an approximate result for charged helices immersed in an electrolyte solution. The latter result becomes exact in the asymptotic limit of large separations. Molecular chirality of helices manifests itself in a torque that tends to twist helices in a certain direction out of parallel alignment and that has a nontrivial behavior at small interaxial angles. We illustrate the theory with the calculation of the torque between layers of idealized, DNA-like double helices in cholesteric aggregates. We propose a mechanism of the observed cholesteric-to-columnar phase transition and suggest an explanation for the observed macroscopic (0.4–5 μm) pitch of the cholesteric phase of B-DNA.

  • Received 15 October 1999

DOI:https://doi.org/10.1103/PhysRevE.62.2576

©2000 American Physical Society

Authors & Affiliations

A. A. Kornyshev*

  • Institute for Theoretical Physics, University of California at Santa Barbara, Santa Barbara, California 93106
  • Research Center “Jülich,” D-52425 Jülich, Germany

S. Leikin

  • Laboratory of Physical and Structural Biology, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892

  • *Permanent address: Research Center “Julich.”
  • FAX: 1-301-496-2172. Email address: leikin@helix.nih.gov

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Vol. 62, Iss. 2 — August 2000

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