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Molecular-dynamics simulation evidences of a boson peak in protein hydration water

Alessandro Paciaroni, Anna Rita Bizzarri, and Salvatore Cannistraro
Phys. Rev. E 57, R6277(R) – Published 1 June 1998
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Abstract

Molecular-dynamics (MD) simulations of a hydrated protein system, performed at different temperatures, allowed us to point out anomalies in the low-frequency spectral features of hydration water. The dynamical structure factor calculated from the water MD trajectories shows, below 180 K, a broad inelastic peak in the low-frequency region (1.3meV) reminiscent of the so-called boson peak observed in amorphous disordered materials. Additional evidence of this boson peak is provided by the calculated vibrational density of states. The behavior of the simulated dynamical susceptibility at various temperatures was found to be very similar to that recently obtained by scattering experiments in similar systems. Possible implications of these anomalies in the protein-solvent coupling mechanisms are briefly discussed.

  • Received 29 December 1997

DOI:https://doi.org/10.1103/PhysRevE.57.R6277

©1998 American Physical Society

Authors & Affiliations

Alessandro Paciaroni1, Anna Rita Bizzarri1,2, and Salvatore Cannistraro1,2,*

  • 1Unitá INFM, Dipartimento di Fisica dell’Universitá, I-06100 Perugia, Italy
  • 2Dipartimento Scienze Ambientali, Sezione Chimica e Fisica, Universitá della Tuscia, I-01100 Viterbo, Italy

  • *Author to whom correspondence should be addressed. Electronic address: cannistraro@pg.infn.it

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Vol. 57, Iss. 6 — June 1998

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