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Lattice ribbons: A model of double-stranded polymers

E.J. Janse van Rensburg, E. Orlandini, D.W Sumners, M.C. Tesi, and S.G. Whittington
Phys. Rev. E 50, R4279(R) – Published 1 December 1994
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Abstract

We introduce a discrete ribbon model for double-stranded polymers (such as duplex DNA) where the ribbon is constrained to lie on the simple cubic lattice Z3. The ribbon is made up of a sequence of plaquettes and can either be open or closed. We investigate the growth of the number of ribbons as a function of the number of plaquettes and use Monte Carlo methods to estimate the dimensions of the ribbon, the writhe of the backbone and, in the case of orientable closed ribbons, the linking number of the two boundary curves.

  • Received 24 August 1994

DOI:https://doi.org/10.1103/PhysRevE.50.R4279

©1994 American Physical Society

Authors & Affiliations

E.J. Janse van Rensburg

  • Department of Mathematics, York University, Downsview, Ontario, Canada M3J1P3

E. Orlandini

  • Department of Chemistry, University of Toronto, Toronto, Ontario, Canada M5S1A1

D.W Sumners

  • Department of Mathematics, Florida State University, Tallahassee, Florida 32306-3027

M.C. Tesi and S.G. Whittington

  • Department of Chemistry, University of Toronto, Toronto, Ontario, Canada M5S1A1

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Vol. 50, Iss. 6 — December 1994

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