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Computation of the fraction of RNA sequences that fold sequentially into a unique free-energy minimum

Ariel Fernández
Phys. Rev. A 46, R4524(R) – Published 1 October 1992
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Abstract

We compute the fraction of RNA sequences of fixed length N=220 that fold expeditiously and reproducibly into a unique structure within realistic RNA replication time spans. The search in conformation space is assumed to be concurrent with the assembling of the molecule which occurs by sequential incorporation of nucleotides. Monte Carlo simulations of the folding events concomitant with polymerization events are used to determine the evolutionary consequences of the principle of expeditious and reproducible folding hereby introduced.

  • Received 6 January 1992

DOI:https://doi.org/10.1103/PhysRevA.46.R4524

©1992 American Physical Society

Authors & Affiliations

Ariel Fernández

  • Department of Chemistry, University of Miami, Coral Gables, Florida 33124
  • Department of Biochemistry and Molecular Biology, The Medical School, P.O. Box 016129, Miami, Florida 33101-6129
  • Max-Planck-Institut für Biophysikalische Chemie, Am Fassberg 11, W-3400 Göttingen, Germany

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Vol. 46, Iss. 8 — October 1992

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